APPLICATION OF MOLECULAR MARKERS IN FORENSIC BOTANY
DOI:
https://doi.org/10.54112/bbasr.v2016i1.6Keywords:
Molecular markers, Forensic Sciences, Forensic Botany, RAPD, AFLP, SNP, SSRAbstract
Molecular markers based on DNA sequence have become a remarkable tool in the Forensic Sciences for the identification of culprits. Now a day’s majority of criminal cases are being solved based on DNA evidence from different biological materials like blood, boon, semen, nails with skin piece, hair with hair follicle, spores and any plant part etc. available at the scene of crime. Presently, DNA evidence from plants have also played an important role in solving forensic cases and DNA from any plant part found at the site of incidence can be used to locate the murderers, kidnapers, victims or in arresting drug traffickers. All molecular markers are not useful in Forensic Botany, only some molecular markers are used for plant DNA evidence which includes DNA barcoding, RAPD (Random Amplified Polymorphic DNA), RFLP (Restriction Fragment Length Polymorphism), AFLP (Amplified Fragment Length Polymorphism), SNP (Single Nucleotide Polymorphism) and Microsatellites, but the most widely used molecular marker for plant evident is SSR (Simple Sequence Repeats) due to its high reproducibility with great discrimination power and error free results from small piece of evidence.
References
Alghanim, H., and Almirall, J. (2003). Development of microsatellite markers in Cannabis sativa for DNA typing and genetic relatedness analyses. Analytical and Bioanalytical Chemistry 376, 1225-1233. DOI: https://doi.org/10.1007/s00216-003-1984-0
Bennett, J. (1997). White paper: genomics for filamentous fungi. Fungal Genetics and Biology 21, 3-7. DOI: https://doi.org/10.1006/fgbi.1997.0969
Bhaskar, R. K. I., Goyal SP (2011). Identification Of Forensic Case Using Molecular Markers: A Case Study Of Hyaena (Hyaena Hyaena),. International Journal of Pharma and Bio Sciences, 2, 561-571.
Brown, B. a. E., J. (2003). Population genetics: principles and applications for fisheries scientists. Editor Hallerman, Eric M. Nuclear DNA. American Fisheries Society, Bethesda, Maryland., 101-123.
Chandra, R., and Sharma, V. (2014). Forensic Botany: An Emerging Discipline of Plant Sciences. Indian Botanists Blog-o-Journal, 1-8.
Chawla, H. (2002). "Introduction to plant biotechnology," Science Publishers, New Delhi, India: Oxford & IBH Publishing Co. Pvt Ltd.
Congiu, L., Chicca, M., Cella, R., Rossi, R., and Bernacchia, G. (2000). The use of random amplified polymorphic DNA (RAPD) markers to identify strawberry varieties: a forensic application. Molecular Ecology 9, 229-232. DOI: https://doi.org/10.1046/j.1365-294x.2000.00811.x
Corsini, G., Manubens, A., Lladser, M., Lobos, S., Seelenfreund, D., and Lobos, C. (1999). AFLP analysis of the fruit fly Ceratitis capitata. Focus 21, 72-73.
Coyle, H. M., Ladd, C., Palmbach, T., and Lee, H. C. (2001). The green revolution: botanical contributions to forensics and drug enforcement. Croatian Medical Journal 42, 340-345.
Coyle, H. M., Lee, C., Lin, W., Lee, H. C., and Palmbach, T. M. (2005). Forensic botany: using plant evidence to aid in forensic death investigation. Croatian medical journal 46, 606.
Coyle, H. M., Palmbach, T., Juliano, N., Ladd, C., and Lee, H. C. (2003). An overview of DNA methods for the identification and individualization of marijuana. Croatian medical journal 44, 315-321.
Craft, K. J., Owens, J. D., and Ashley, M. V. (2007). Application of plant DNA markers in forensic botany: genetic comparison of Quercus evidence leaves to crime scene trees using microsatellites. Forensic science international 165, 64-70. DOI: https://doi.org/10.1016/j.forsciint.2006.03.002
Dutra, L., Stathopoulou, G., Basden, S. L., Leyro, T. M., Powers, M. B., and Otto, M. W. (2008). A meta-analytic review of psychosocial interventions for substance use disorders. American Journal of Psychiatry 165, 179-187. DOI: https://doi.org/10.1176/appi.ajp.2007.06111851
Edlund, H. (2010). Sensitive Identification Tools in Forensic DNA Analysis, Acta Universitatis Upsaliensis.
Eurlings, M., Lens, F., Pakusza, C., Peelen, T., Wieringa, J. J., and Gravendeel, B. (2013). Forensic identification of Indian snakeroot (Rauvolfia serpentina Benth. ex Kurz) using DNA barcoding. Journal of forensic sciences 58, 822-830. DOI: https://doi.org/10.1111/1556-4029.12072
Gigliano, G. S., Caputo, P., and Cozzolino, S. (1997). Ribosomal DNA analysis as a tool for the identification of Cannabis sativa L. specimens of forensic interest. Science & Justice 37, 171-174. DOI: https://doi.org/10.1016/S1355-0306(97)72170-1
Gillan, R., Cole, M., Linacre, A., Thorpe, J., and Watson, N. (1995). Comparison of Cannabis sativa by random amplification of polymorphic DNA (RAPD) and HPLC of cannabinoids: a preliminary study. Science & Justice 35, 169-177. DOI: https://doi.org/10.1016/S1355-0306(95)72658-2
Gilmore, S., Peakall, R., and Robertson, J. (2003). Short tandem repeat (STR) DNA markers are hypervariable and informative in Cannabis sativa: implications for forensic investigations. Forensic science international 131, 65-74. DOI: https://doi.org/10.1016/S0379-0738(02)00397-3
Hsieh, H.-M., Chiang, H.-L., Tsai, L.-C., Lai, S.-Y., Huang, N.-E., Linacre, A., and Lee, J. C.-I. (2001). Cytochrome b gene for species identification of the conservation animals. Forensic Science International 122, 7-18. DOI: https://doi.org/10.1016/S0379-0738(01)00403-0
Hsieh, H.-M., Tsai, C.-C., Tsai, L.-C., Chiang, H., Huang, N.-E., Shih, R. T.-P., Linacre, A., and Lee, J. C.-I. (2005). Species identification of meat products using the cytochrome b gene. Forensic Sci J 4, 29-36.
Huys, G., Coopman, R., Janssen, P., and Kersters, K. (1996). High-resolution genotypic analysis of the genus Aeromonas by AFLP fingerprinting. International Journal of Systematic and Evolutionary Microbiology 46, 572-580. DOI: https://doi.org/10.1099/00207713-46-2-572
Kikkawa, H. S., Tahara, M., and Sugita, R. (2015). Forensic DNA Analysis of Wheat Flour as Commonly Used in White Powder Cases. Journal of forensic sciences 60, 1316-1321. DOI: https://doi.org/10.1111/1556-4029.12789
Koopman, W. J., Kuiper, I., Klein-Geltink, D. J., Sabatino, G. J., and Smulders, M. J. (2012). Botanical DNA evidence in criminal cases: Knotgrass (Polygonum aviculare L.) as a model species. Forensic Science International: Genetics 6, 366-374. DOI: https://doi.org/10.1016/j.fsigen.2011.07.013
Kumar, L. D., Kathirvel, M., Rao, G., and Nagaraju, J. (2001). DNA profiling of disputed chilli samples (Capsicum annum) using ISSR-PCR and FISSR-PCR marker assays. Forensic Science International 116, 63-68. DOI: https://doi.org/10.1016/S0379-0738(00)00350-9
Kumar, P., Gupta, V., Misra, A., Modi, D., and Pandey, B. (2009). Potential of molecular markers in plant biotechnology. Plant Omics 2, 141.
Lee, E. J., Hwang, I. K., Kim, N. Y., Lee, K. L., Han, M. S., Lee, Y. H., Kim, M. Y., and Yang, M. S. (2010). An assessment of the utility of universal and specific genetic markers for opium poppy identification. Journal of forensic sciences 55, 1202-1208. DOI: https://doi.org/10.1111/j.1556-4029.2010.01423.x
Lemke, P., Barrett, V., and Dixon, R. (1991). 10 Procedures and Prospects for DNA-Mediated Transformation of Ectomycorrhizal Fungi. Methods in microbiology 23, 281-293. DOI: https://doi.org/10.1016/S0580-9517(08)70180-6
Magalhães, M., Martinez, R. A., and Gaiotto, F. A. (2007). Genetic diversity of Litopenaeus vannamei cultivated in Bahia State, Brazil. Pesquisa Agropecuária Brasileira 42, 1131-1136. DOI: https://doi.org/10.1590/S0100-204X2007000800009
Mestel, R. (1993). Murder trial features tree's genetic fingerprint. New Scientist 138, 6.
Miller Coyle, H., Divakaran, K., Jachimowicz, E., Ladd, C., and Lee, H. (2001). Individualization of marijuana (Cannabis sativa) samples for forensics applications and narcotics enforcement. In "Proceedings of the American Academy of Forensic Sciences 53rd Annual Meeting", pp. 19-24.
Omondi, E. O., Debener, T., Linde, M., Abukutsa-Onyango, M., Dinssa, F. F., and Winkelmann, T. (2016). Molecular markers for genetic diversity studies in African leafy vegetables. Advances in Bioscience and Biotechnology 7, 188. DOI: https://doi.org/10.4236/abb.2016.73017
Phillips, M. L. (2008). Crime scene genetics: transforming forensic science through molecular technologies. BioScience 58, 484-489. DOI: https://doi.org/10.1641/B580604
Schield, C., Campelli, C., Sycalik, J., Randle, C., Hughes-Stamm, S., and Gangitano, D. (2016). Identification and persistence of Pinus pollen DNA on cotton fabrics: A forensic application. Science & Justice 56, 29-34. DOI: https://doi.org/10.1016/j.scijus.2015.11.005
Shukla, R. K. (2016). Forensic Biotechnology: Application of Flow Cytometry in Legal Medicine. International Journal of Forensic Sciences 1, 1-2. DOI: https://doi.org/10.23880/IJFSC-16000103
Singh, P. K., Sharma, H., Srivastava, N., and Bhagyawant, S. S. (2014). Analysis of genetic diversity among wild and cultivated chickpea genotypes employing ISSR and RAPD markers. American Journal of Plant Sciences 5, 1-7. DOI: https://doi.org/10.4236/ajps.2014.55082
Slavov, G., Howe, G., Yakovlev, I., Edwards, K., Krutovskii, K., Tuskan, G., Carlson, J., Strauss, S. H., and Adams, W. (2004). Highly variable SSR markers in Douglas-fir: Mendelian inheritance and map locations. Theoretical and Applied Genetics 108, 873-880. DOI: https://doi.org/10.1007/s00122-003-1490-y
Stubbs, S. L., Brazier, J. S., Talbot, P. R., and Duerden, B. I. (2000). PCR-restriction fragment length polymorphism analysis for identification of Bacteroides spp. and characterization of nitroimidazole resistance genes. Journal of clinical microbiology 38, 3209-3213. DOI: https://doi.org/10.1128/JCM.38.9.3209-3213.2000
Sunnucks, P. (2000). Efficient genetic markers for population biology. Trends in Ecology & Evolution 15, 199-203. DOI: https://doi.org/10.1016/S0169-5347(00)01825-5
Van de Ven, W. T. G., and McNicol, R. J. (1995). The use of RAPD markers for the identification of Sitka spruce (Picea sitchensis) clones. HEREDITY-LONDON- 75, 126-126. DOI: https://doi.org/10.1038/hdy.1995.115
Virtanen, V., Korpelainen, H., and Kostamo, K. (2007). Forensic botany: usability of bryophyte material in forensic studies. Forensic science international 172, 161-163. DOI: https://doi.org/10.1016/j.forsciint.2006.11.012
Wan, Q.-H., and Fang, S.-G. (2003). Application of species-specific polymerase chain reaction in the forensic identification of tiger species. Forensic Science International 131, 75-78. DOI: https://doi.org/10.1016/S0379-0738(02)00398-5
Ward, J., Peakall, R., Gilmore, S., and Robertson, J. (2005). A molecular identification system for grasses: a novel technology for forensic botany. Forensic science international 152, 121-131. DOI: https://doi.org/10.1016/j.forsciint.2004.07.015
Yoon, C. K. (1993). Botanical witness for the prosecution. Science 260, 894-896. DOI: https://doi.org/10.1126/science.8493521
Zaya, D. N., and Ashley, M. V. (2012). Plant genetics for forensic applications. Plant DNA Fingerprinting and Barcoding: Methods and Protocols, 35-52. DOI: https://doi.org/10.1007/978-1-61779-609-8_4
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